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Application of numerical and statistical tools to Marine Ecology studies
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  Contributions to Marine Ecology Research

 
 

Marine observing systems, biogeochemical fluxes and ecological modelling


Marine fisheries ecology and applied fisheries


 

Cruzado, A., Bernardello, R., Ahumada-Sempoal, M.A., Bahamon, N. 2012. Modelling the pelagic ecosystem dynamics: The NW Mediterranean. 26 pp. In: A. Cruzado (ed). Marine Ecosystems. InTech Open Access Publisher . Rijeka, Croatia (in press). I WANT A REPRINT

Methods: 3D marine ecosystem models

Bahamon, N., Aguzzi, J., Bernardello, R., Ahumada-Sempoal, M-A., Puigdefabregas, J., Cateura, J., Muñoz, E., Velásquez, Z., Cruzado, A. 2011. The new pelagic Operational Observatory of the Catalan Sea (OOCS) for the multisensor coordinated measurement of atmospheric and oceanographic conditions. Sensors. 11: 11251-11272. I WANT A REPRINT

Methods: oceanographic instrumentation, coastal observing systems

Bahamon, N., Cruzado, A., Velasquez, Z., Bernardello, R., Donis, D. 2010. Patterns of phytoplankton chlorophyll variability in Mediterranean Seas. Rapp. Comm. int. Mer Médit., 39, 436. I WANT A REPRINT

Methods: Empirical Orthogonal Functions (EOFs)

Libralato, S., Arneri, E., Bahamon, N., Coll, M., Cossarini,G. Morello,E. B., Palomera, I., Santojanni, A., Solidoro, C. 2010. Effects of climate-driven changes on the north-central Adriatic food web: Insights from an end-to-end approach. Rapp. Comm. int. Mer Médit., 39, 570. I WANT A REPRINT

Methods: End-to-end modelling approach

Bahamon, N.; Cruzado, A.; Bernardello, R.; Ahumada, M.A.. 2011. The New Pelagic Operational Observatory of the Catalan Sea (OOCS): Consolidating long time series observations. Instrumentation Viewpoint 11: 43.

Bahamon, N., Bernardello, R., Cruzado, A.,Ahumada, M.A., Donis, D. 2010. Operational Observatory of the Catalan Sea (OOCS). In: Proceedings of OceanObs'09: Sustained Ocean Observations and Information for Society (Annex), Venice, Italy, 21-25 September 2009, Hall, J., Harrison, D.E. & Stammer, D., Eds., ESA Publication WPP-306.I WANT A REPRINT

Cruzado, A., Bahamon, N., Bernardello, R., Ahumada, M.A., Donis, D., Cardoso, G. 2009. Operacional Observatory of the Catalan Sea. Instrumentation Viewpoint 8: 75. I WANT A REPRINT

Methods: Real time observing system, numerical modelling

Bahamon, N., Bernardello, R.,Velasquez, Z., Cruzado, A., Weeks, A. Chlorophyll predictabitily in a highly dynamic temperate oceanographic station (submitted).

Methods: Generalised additive models (GAM), regression trees

Bernardello, R., Ahumada, M.A., Bahamon, N., Cruzado, A. Quantitative validation of a 3D coupled hydrodynamic biogeochemical model of the NW Mediterranean Sea (submitted).

Methods: 3D coupled ecomodel, cost function, model error, model efficiency, correlation

Bahamon, N., Cruzado, A., 2003. Modelling nitrogen fluxes in oligotrophic marine environments: NW Mediterranean Sea and NE Atlantic. Ecological Modelling 163(3): 223-244. I WANT A REPRINT

Methods: 1 DV numerical model

Bahamon, N., Velazquez, Z., Cruzado, A., 2003. Chlorophyll-a and nitrogen fluxes in the tropical North Atlantic Ocean. Deep-sea Research I, 50(10-11): 1189-1203. I WANT A REPRINT

Methods: vertical diffusive fluxes

Bahamon, N., Velazquez, Z., Cruzado, A., 2003. Chlorophyll-a and nitrogen fluxes in the tropical North Atlantic Ocean. Journal of Geobiology 2(12): http://earth.elsevier.com/geobiology

Methods: vertical diffusive fluxes

Bahamon, N., 2002. Dynamics of oligotrophic pelagic environments: NW Mediterranean Sea and subtropical North Atlantic. PhD Thesis, Universitat Politècnica de Catalunya, Barcelona, Spain. 172 p. ISBN-4725-2003/84-688-0734-6. I WANT A REPRINT

Methods: 1DV numerical modelling, diffusive and advective fluxes

Bahamon, N., Cruzado, A., Velasquez, Z. 2000. Nitrogen fluxes in oligotrophic marine environments computed with a one-dimensional ecological model. Ocean Biogeochemistry: A New Paradigm. p. 101.

Methods: 1DV numerical modelling, diffusive and advective fluxes

Cruzado, A., Velasquez, Z., Perez, M.C., Bahamon, N., Grimaldo, N.S., Ridolfi, F., 2002. Nutrient fluxes from the Ebro River and subsequent across-shelf dispersion. Continental Shelf Research 22(2): 349-360. I WANT A REPRINT

Cruzado, A., García, H.E., Velásquez, Z.R., Grimaldo, N.S., Bahamon, N., 1998. The Ria de Huelva (SW Spain). Hydrography and general characteristics. In: Morales, J.A., Borrego, J. (Eds.), European Land-Ocean Interaction Studies, Second Annual Scientific Conference: Abstracts 83

Bahamon, N., Cruzado, A., Velázquez, Z., Weeks, A. 2003. Variability of the underwater light field and chlorophyll a in the Blanes Canyon (NW Mediterranean Sea) during the MERIS-ENVISAT calibration exercise. MERIS Workshop Proceeding, Oct 2003, Frascati, Italy. I WANT A REPRINT

Weeks, A., Robinson, I., Byfield, V., Cruzado, A., Velasquez, Z., Bahamon, N. 2003. MERIS Validation in the North West Mediterranean and the Mascarene Ridge (Indian Ocean). MERIS Workshop Proceeding, Oct 2003, Frascati, Italy. I WANT A REPRINT


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Aguzzi, J., Company, J.B., Costa, C., Matabos, M., Azzurro, E., Manuel, A., Menesatti, P., Sardà, F., Canals, M., Delory, E., Cline, D., Favali, P., Juniper, K.S., Furushima, Y., Fujiwara, Y., Chiesa, J.J., Marotta, L., Bahamon, N., Priede, I.G. 2012. Challenges to the assessment of benthic populations and biodiversity as a result of rhythmic behaviour: Video solutions from cabled observatories. Oceanography and Marine Biology: An Annual Review, 50 (in press). I WANT A REPRINT

Methods: Review

Aguzzi, J., Company J.B., Costa, C., Menesatti, P., Garcia, J.A., Bahamon, N., Puig, P., Sardà, F. 2011. Activity rhythms in deep-sea: a chronobiological approach. Frontiers in Bioscience 16: 161-150. I want a reprint

Methods: Review

Bahamon, N., Sardà, F., Aguzzi, J. 2009. Fuzzy diel pattern in catchability of deep-water continental margin species. ICES Journal of Marine Science 66: 2211-2218. I WANT A REPRINT

Methods: Fuzzy clustering, hierarchical clustering

Aguzzi, J., Bahamon, N. 2009. Modelled day-night biases in decapod assessment by bottom trawling survey. Fisheries Research 100: 274-280. I WANT A REPRINT

Methods: Multidimensional scaling, generalised additive models

Sardà, F., Company, J.B., Bahamon, N., Rotllant,  G., Flexas, M.M., Sánchez, J.D., Zúñiga, D., Coenjaerts, J., Orellana, D., Jordà,  G., Puigdefábregas, J., Sánchez-Vidal, A.,  Calafat, A., Martin, D., Espino, M. 2009. Relationship between environment and occurrence of the deep-water rose shrimp Aristeus antennatus (Risso, 1816) in the Blanes submarine canyon (NW Mediterranean). Progress in oceanography 82: 227-238. I WANT A REPRINT

Methods: Generalised additive models, regression trees

Aguzzi, J., Bahamon, N., Marotta, L. 2009. The influence of light availability and predatory behavior of Nephrops norvegicus on the activity rhythms in continental margin decapods. Marine Ecology 30: 366-375. I WANT A REPRINT

Methods: Multidimensional scaling, generalised additive models

Coll, M., Bahamon, N., Sarda, F, Suuronen, P., Palomera, I., Tudela, T. 2008. Setting trawl selectivity measures within an ecosystem context in the NW Mediterranean. Marine Ecology Progress Series 355:131–147.I WANT A REPRINT

Methods: Food web model, virtual population analysis

WWF Mediterranean. 2008. Ecosystem-based assessment of the effects of increasing trawl selectivity in the Mediterranean. Switching to square-meshed nets - A first step on the long journey towards sustainability. Report. Coordinated by M. Coll and participated by N. Bahamón, S. Sardà y P. Suuronen. 68 pp. I WANT A REPRINT

Martín, P., Bahamon, N., Sabates, N., Maynou, F., Sanchez, P., Demestre, M. 2008. European anchovy (Engraulis encrasicolus) landings and environmental conditions in the Catalan Coast (NW Mediterranean) during 2000- 2005. Hydrobiologia 612: 185-199. I WANT A REPRINT

Methods: Cross-correlations, generalised additive models

Sardà, F., Bahamon, N. 2008. Mallas cuadradas y rejillas separadoras de pescado para mejorar la selectividad de la pesca de arrastre demersal. Quaderns Blaus No. QB019. Càtedra d’Estudis Marítims (Universitat de Girona – Ajuntament de Palamós) I Museu de la Pesca. 22pp.

Sardà, F., Bahamon, N. 2008. Les malles quadrades per millorar la selectivitat de la pesca d’arrossegament. Pesca Mar 6: 7-8. I WANT A REPRINT

Bahamon, N., Sarda, F., Suuronen, P. 2007. Potential benefits from improved selectivity in the northwest Mediterranean multispecies trawl fishery. ICES Journal of Marine Science 64: 757-760. I WANT A REPRINT

Methods: logistic functions

Bahamon, N., Sarda, F. Suuronen, P. 2007. Selectivity of flexible size-sorting grid in Mediterranean multi-species trawl fishery. Fisheries Science 73(6): 1231-1240. I WANT A REPRINT

Sarda, F., Bahamon, N., Sarda-Palomera, F., Moli, B. 2006. Selectivity performance of a square mesh codend and sorting grid in multispecies trawl fishery in NW Mediterranean. Scientia Marina 70: 347-353. I WANT A REPRINT

Bahamon, N., Sarda, F., Suuronen, P. 2006. Improvement of trawl selectivity in the NW Mediterranean demersal fishery by using a 40 mm square. Fisheries Research 81: 15-25. I WANT A REPRINT

Sarda, F., Bahamon, N., Sarda-Palomera, F., Moli, B., 2005. Commercial testing of a sorting grid to reduce catches of juvenile hake (Merluccius merluccius) in the western Mediterranean demersal trawl fishery. Aquatic Living Resources 18, 87-91. I WANT A REPRINT

Rivera-Monroy, V., Torres, L.A., Bahamon, N., Newmark, F., Twilley, R., 1999. The potential use of mangrove forest as nitrogen sinks of shrimp aquaculture pond effluents: the role of denitrification. Journal of the World Aquaculture Society 30(1): 12-25. I WANT A REPRINT


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